Package: rChEA3
Title: R Client for the 'ChEA3' Transcription Factor Enrichment API
Version: 1.0.1
Authors@R: 
    person("Christophe", "Tav",
    email = "christophe.tav@gmail.com",
    role = c("aut", "cre"),
    comment = c(ORCID = "0000-0001-8808-9617"))
Description: Interface to the 'ChEA3' transcription factor enrichment
        API. 'ChEA3' integrates evidence from ChIP-seq, co-expression,
        and literature resources to prioritize transcription factors
        regulating a given set of genes. This package provides
        convenient R functions to query the API, retrieve ranked
        results across collections (including integrated scores), and
        standardize output for downstream analysis in R/Bioconductor
        workflows. See <https://maayanlab.cloud/chea3/> or Keenan
        (2019) <doi:10.1093/nar/gkz446> for further details.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 8.0.0
URL: https://github.com/ckntav/rChEA3, https://ckntav.github.io/rChEA3/
BugReports: https://github.com/ckntav/rChEA3/issues
Imports: cli, crayon, dplyr, ggplot2, httr, jsonlite, lubridate, rlang,
        tidyselect, writexl
Depends: R (>= 4.1.0)
LazyData: true
Suggests: knitr, readxl, rmarkdown, testthat (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
Config/pak/sysreqs: libssl-dev zlib1g-dev
Repository: https://ckntav.r-universe.dev
Date/Publication: 2026-05-28 04:39:02 UTC
RemoteUrl: https://github.com/ckntav/rchea3
RemoteRef: HEAD
RemoteSha: 60c788137e1b944e8c3d39497ee28e8f1287ff19
NeedsCompilation: no
Packaged: 2026-07-03 15:18:00 UTC; root
Author: Christophe Tav [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-8808-9617>)
Maintainer: Christophe Tav <christophe.tav@gmail.com>