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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "rChEA3" in publications use:'
type: software
license: MIT
title: 'rChEA3: R Client for the ''ChEA3'' Transcription Factor Enrichment API'
version: 1.0.1
doi: 10.32614/CRAN.package.rChEA3
abstract: Interface to the 'ChEA3' transcription factor enrichment API. 'ChEA3' integrates
  evidence from ChIP-seq, co-expression, and literature resources to prioritize transcription
  factors regulating a given set of genes. This package provides convenient R functions
  to query the API, retrieve ranked results across collections (including integrated
  scores), and standardize output for downstream analysis in R/Bioconductor workflows.
  See <https://maayanlab.cloud/chea3/> or Keenan (2019) <https://doi.org/10.1093/nar/gkz446>
  for further details.
authors:
- family-names: Tav
  given-names: Christophe
  email: christophe.tav@gmail.com
  orcid: https://orcid.org/0000-0001-8808-9617
repository: https://ckntav.r-universe.dev
repository-code: https://github.com/ckntav/rChEA3
commit: 60c788137e1b944e8c3d39497ee28e8f1287ff19
url: https://ckntav.github.io/rChEA3/
date-released: '2026-05-28'
contact:
- family-names: Tav
  given-names: Christophe
  email: christophe.tav@gmail.com
  orcid: https://orcid.org/0000-0001-8808-9617